CDS

Accession Number TCMCG007C16462
gbkey CDS
Protein Id XP_033142359.1
Location join(153732..154013,154086..154556,154707..154917,155164..155321,155428..155498,155574..155679,155759..155851,155939..156068,156160..156461,156538..156589,156676..156713)
Gene LOC103855429
GeneID 103855429
Organism Brassica rapa

Protein

Length 637aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_033286468.1
Definition RNA polymerase II C-terminal domain phosphatase-like 2 isoform X2 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category K
Description RNA polymerase II C-terminal domain phosphatase-like 2
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01009        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
KEGG_ko ko:K18998        [VIEW IN KEGG]
EC 3.1.3.16        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000428        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004647        [VIEW IN EMBL-EBI]
GO:0004721        [VIEW IN EMBL-EBI]
GO:0004722        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006470        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008420        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009733        [VIEW IN EMBL-EBI]
GO:0009734        [VIEW IN EMBL-EBI]
GO:0009755        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0016311        [VIEW IN EMBL-EBI]
GO:0016591        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0016791        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0030880        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032870        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042578        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045893        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055029        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061695        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0070940        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071365        [VIEW IN EMBL-EBI]
GO:0071495        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1902680        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903508        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAATCGTTTAGGTCAGAAATCGGTGGTCTACCACGGAGAGTTGCGTCTGGGGGAGCTTGATGTGAAGCAGGTCTCTTCCGCCTCCGGCAACAACGAATTTCGCTTCCCTAACGACGAGATTCGAATCCACCACGTTTCTCCTGCCGGCGAGAGGTGTCCTCCGCTCGCCATTCTCCAGACTATCGCTTCTTTCTCCGTTCGATGCAAGCTCGAGTCCTCCGCTCCGGTCAAACCTCCCGAGTTGATGCGTCTTCACGCCGTCTGTTTCCATGAATTGAAGACTGCGGTGGTATTGCTGGGAGAAACGGAGATTCATTTAGTGGCGATGCCGAGCAAGGAGAAGAAGTTCCCTTGTTTCTGGTGTTTCTCACTCCCTTTAGGTCTCTACGATTCCTGTTTAAGGATGCTCAACACTCGCTGTCTCTCTATTGTCTTTGATCTTGACGAGACTCTCATTGTTGCCCATACCATGAAGTCCTTTGAGGATCGCATCGAAGCTCTCAAGGTTTGGATCTCCCGGGAGGTTGATCCTGTCAGGATTCATGGAATGTCCGCTGAGCTTAAAAGGTTTATGGATGATAGGATGCTCCTCAAGCAGTATATTGATAATGACTATGCTTTTGATAACGGTGTTTTGCTCAAGGCTCAGCGTGAGGAGGTCCGCCCTACTTCTGACGGCCTCGAGAAAGTTTATAGACCTGTCATTAGATTGCCTGAAAAGAATACCGTTCTTACTCGGATCAATCCTGAGATCCGTGACACTAGTGTGCTTGTAAAACTTAGACCAGCGTGGGAGGAGTTAAGGAGCTATTTGACAGCAAACACTAGGAAACGCTTTGAAGTTTATGTTTGTACCATGGCTGAAAGGGACTATGCTTTGGAAATGTGGAGATTACTCGATCCGGAAGCGCACCTGATAAGCCTCAAGGAGCTTCGAGATCGTATTGTATGCGTTAAACCAGATGCCAAGAAATCGTTGTTAAATGTCTTCAAAGGTGGCATATGCCACCCTAAAATGGCAATGGTTATTGATGATCGTGTTAAGGTTTGGGAGGACAAGGATCAACCACGGGTTCATGTTGTTCCTGCATATCTTCCATATTATGCTCCACAGGCAGAGACAGCCCTTCCCGTTCCAATTCTTTGCGTAGCAAGAAATGTTGCATGCAATGTCAGAGGTTACTTTTTCAAGGAATTTGACGAGAGTTTAATGAGTAGTATATCTTTGGTTTACCATGAAGATGATGTGGAAACTTTACCCCCTTCACCGGATGTGAGCAACTATGTCATTATAGAGGATCCTGGCTTTGCCTCAAATGGAAACATAACTGCTCCTCCAGTTATCGAAGGAATGTGTGGGGGTGAAGTGGAACGCAGACTAAACCAAGCGTCTGCAGCTGATTCTTCTACTCCTGCAACGAGTAACGCTGAGCAGAAATCTGAAACCCCCAAGCCGCAGATAGCAGTTATACCAAATAACGCTAGCACAACAACTGCAGCAGCATTGTTACCTTCTCATAAACCTAGTTTGCTTGGAGCTCCTAAACGAGATGGCTTCACTTTTTCTGATGGTGGAAGACCTCTTATGATGAGGCCTGGTGTTGATATAAGAAACCAGAACTTCAATCAGCCTCCTCTTCTGTCTCGAATTCCTATGCAACCACCTTCGTCTTCTATGCATCCTCAGGGTGGTTGGTTGGTAGATGACGAGAACCGAGCTCCTTTTCCTGGTCGACCTGCAGGAGGTTATTCAAATCAGCTTCCTCATGGTATACAAGGTTCTGCTCCTGTCACCAACCCATCCCACTTGAGGAGCGAAGAGTTATGTGTGGATGATGACCTCAAAAGGCAAAATGCTTCACGTCAACCAACAGCTTGTTTTCAGTGTACCTCATCTTCAGCTACACTATAG
Protein:  
MNRLGQKSVVYHGELRLGELDVKQVSSASGNNEFRFPNDEIRIHHVSPAGERCPPLAILQTIASFSVRCKLESSAPVKPPELMRLHAVCFHELKTAVVLLGETEIHLVAMPSKEKKFPCFWCFSLPLGLYDSCLRMLNTRCLSIVFDLDETLIVAHTMKSFEDRIEALKVWISREVDPVRIHGMSAELKRFMDDRMLLKQYIDNDYAFDNGVLLKAQREEVRPTSDGLEKVYRPVIRLPEKNTVLTRINPEIRDTSVLVKLRPAWEELRSYLTANTRKRFEVYVCTMAERDYALEMWRLLDPEAHLISLKELRDRIVCVKPDAKKSLLNVFKGGICHPKMAMVIDDRVKVWEDKDQPRVHVVPAYLPYYAPQAETALPVPILCVARNVACNVRGYFFKEFDESLMSSISLVYHEDDVETLPPSPDVSNYVIIEDPGFASNGNITAPPVIEGMCGGEVERRLNQASAADSSTPATSNAEQKSETPKPQIAVIPNNASTTTAAALLPSHKPSLLGAPKRDGFTFSDGGRPLMMRPGVDIRNQNFNQPPLLSRIPMQPPSSSMHPQGGWLVDDENRAPFPGRPAGGYSNQLPHGIQGSAPVTNPSHLRSEELCVDDDLKRQNASRQPTACFQCTSSSATL